Zymo-Research / aladdin-shotgun

MIT License
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Host removal should use the genome index that come with the pipeline #31

Open zxl124 opened 1 year ago

zxl124 commented 1 year ago

User shouldn't need to supply the host genome index, they can if they want to, but it shouldn't be mandatory. For most cases, the user should select an organism, say human, and pipeline should load from what's already there (igenomes.config).