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a-h-b / dadasnake

Amplicon sequencing workflow heavily using DADA2 and implemented in snakemake
GNU General Public License v3.0
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Multiple cores when using option -l #23

Closed thierryjanssens closed 2 years ago

thierryjanssens commented 2 years ago

How can I use multiple cores when working on a single server, not a cluster. The -l option uses a single core.

a-h-b commented 2 years ago

you can actually use -t with the -loption. As in

dadasnake -l -t 10 ./my_config.yaml

Best wishes - a