How does consensus handle hablotypic scenarios?

[a-ludi]

How will the consensus of two equally represented hablotypes look like?

Example:

Input:

tttccgccttacacaacacagtgttctgctattgcccagagggcactttt
tttgcatcaaactggaaacctagaaaaaatgggtgatttcctagtaattt

Consensus Result:

tttccg-ccttacacaacacagtgttctgctattgcccag-agggcactt
|||*||*|||||||||||||||||||*||||*|||||*||*|||||||||
tttgcgtccttacacaacacagtgtt-tgct-ttgcctagtagggcactt

tttgcatcaaactggaaacctagaaaaaatgggtgattt-cctagta----a-ttt
||||||||||*||*||*||**|*|*|*|*||**||*|||*||*||*|****|*|||
tttgcatcaa-cttgacac--a-acacagtgtttgctttgcccag-agggcacttt