Describe the solution you'd like
Currently, when we compute edges (graphein.protein.edges.distance) we make use of the distance between the interacting nodes in assigning the edge. However, we do not store this information as an edge attribute. This would be very useful as it is a very standard feature in protein GNN models.
a-r-j
commented
2 years ago
Describe the solution you'd like Currently, when we compute edges (
graphein.protein.edges.distance) we make use of the distance between the interacting nodes in assigning the edge. However, we do not store this information as an edge attribute. This would be very useful as it is a very standard feature in protein GNN models.