a-r-j / graphein

Protein Graph Library
https://graphein.ai/
MIT License
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Hydrogen bond acceptor/donor features #150

Closed a-r-j closed 2 years ago

a-r-j commented 2 years ago

Reference Issues/PRs

145

What does this implement/fix? Explain your changes

Adds hydrogen bond donor/acceptor featurisation options.

What testing did you do to verify the changes in this PR?

Tests pending.

codecov-commenter commented 2 years ago

Codecov Report

Merging #150 (9b450fe) into master (8123f42) will increase coverage by 4.00%. The diff coverage is 50.58%.

@@            Coverage Diff             @@
##           master     #150      +/-   ##
==========================================
+ Coverage   40.27%   44.27%   +4.00%     
==========================================
  Files          48       55       +7     
  Lines        2811     3587     +776     
==========================================
+ Hits         1132     1588     +456     
- Misses       1679     1999     +320     
Impacted Files Coverage Δ
graphein/grn/parse_trrust.py 37.77% <ø> (ø)
graphein/ml/conversion.py 0.00% <0.00%> (ø)
graphein/ml/diffusion.py 0.00% <0.00%> (ø)
graphein/ppi/edges.py 100.00% <ø> (ø)
graphein/ppi/graph_metadata.py 0.00% <ø> (ø)
graphein/ppi/graphs.py 54.34% <ø> (ø)
graphein/ppi/parse_biogrid.py 75.00% <ø> (ø)
graphein/ppi/visualisation.py 0.00% <0.00%> (ø)
graphein/protein/analysis.py 0.00% <0.00%> (ø)
graphein/protein/features/sequence/embeddings.py 34.61% <ø> (-1.24%) :arrow_down:
... and 38 more

Continue to review full report at Codecov.

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sonarcloud[bot] commented 2 years ago

Kudos, SonarCloud Quality Gate passed!    Quality Gate passed

Bug A 0 Bugs
Vulnerability A 0 Vulnerabilities
Security Hotspot A 0 Security Hotspots
Code Smell A 0 Code Smells

No Coverage information No Coverage information
0.0% 0.0% Duplication