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a-r-j / graphein

Protein Graph Library
https://graphein.ai/
MIT License
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Insertion codes #255

Closed anton-bushuiev closed 1 year ago

anton-bushuiev commented 1 year ago

Hi, @a-r-j!

I have a quick question. What is the motivation of having insertions=False by default in ProteinGraphConfig? I am trying to understand the insertions better and to me it seems that they should be treated as a normal part of the structure. So, I would set insertions=True by default.

The example from 1G0U: image

anton-bushuiev commented 1 year ago

See discussion in https://github.com/a-r-j/graphein/pull/263.