Error during `Getting requirements to build wheel`

[valentynbez]

Describe the bug Problem during installation.

To Reproduce Steps to reproduce the behavior:

1. pip install graphein

/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/config/setupcfg.py:293: _DeprecatedConfig: Deprecated config in `setup.cfg`
      !!

              ********************************************************************************
              The license_file parameter is deprecated, use license_files instead.

              By 2023-Oct-30, you need to update your project and remove deprecated calls
              or your builds will no longer be supported.

              See https://setuptools.pypa.io/en/latest/userguide/declarative_config.html for details.
              ********************************************************************************

      !!
        parsed = self.parsers.get(option_name, lambda x: x)(value)
      running egg_info
      writing lib3/PyYAML.egg-info/PKG-INFO
      writing dependency_links to lib3/PyYAML.egg-info/dependency_links.txt
      writing top-level names to lib3/PyYAML.egg-info/top_level.txt
      Traceback (most recent call last):
        File "/nfs/cds-peta/exports/biol_micro_cds_gr_sunagawa/scratch/vbezshapkin/conda-envs/graphein/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
          main()
        File "/nfs/cds-peta/exports/biol_micro_cds_gr_sunagawa/scratch/vbezshapkin/conda-envs/graphein/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
          json_out['return_val'] = hook(**hook_input['kwargs'])
        File "/nfs/cds-peta/exports/biol_micro_cds_gr_sunagawa/scratch/vbezshapkin/conda-envs/graphein/lib/python3.10/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 118, in get_requires_for_build_wheel
          return hook(config_settings)
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/build_meta.py", line 341, in get_requires_for_build_wheel
          return self._get_build_requires(config_settings, requirements=['wheel'])
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/build_meta.py", line 323, in _get_build_requires
          self.run_setup()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/build_meta.py", line 338, in run_setup
          exec(code, locals())
        File "<string>", line 271, in <module>
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/__init__.py", line 107, in setup
          return distutils.core.setup(**attrs)
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/_distutils/core.py", line 185, in setup
          return run_commands(dist)
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/_distutils/core.py", line 201, in run_commands
          dist.run_commands()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
          self.run_command(cmd)
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/dist.py", line 1234, in run_command
          super().run_command(command)
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
          cmd_obj.run()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/command/egg_info.py", line 314, in run
          self.find_sources()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/command/egg_info.py", line 322, in find_sources
          mm.run()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/command/egg_info.py", line 551, in run
          self.add_defaults()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/command/egg_info.py", line 589, in add_defaults
          sdist.add_defaults(self)
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/command/sdist.py", line 104, in add_defaults
          super().add_defaults()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/_distutils/command/sdist.py", line 251, in add_defaults
          self._add_defaults_ext()
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/_distutils/command/sdist.py", line 336, in _add_defaults_ext
          self.filelist.extend(build_ext.get_source_files())
        File "<string>", line 201, in get_source_files
        File "/tmp/pip-build-env-vvdwbcqz/overlay/lib/python3.10/site-packages/setuptools/_distutils/cmd.py", line 107, in __getattr__
          raise AttributeError(attr)
      AttributeError: cython_sources
      [end of output]

  note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error

• OS: Red Hat Enterprise Server7.9
• Python Version 3.10.0
• Graphein Version 1.7.0

[valentynbez]

Worked with conda installation instructions.

[a-r-j]

Hi @valentynbez would you be able to try again with the new release? pip install graphein==1.7.1. Thanks!

[valentynbez]

All smooth, thank you :)