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a-slide
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NanoCount
EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2
https://a-slide.github.io/NanoCount/
MIT License
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#6
Closed
a-slide
closed
4 years ago
a-slide
commented
4 years ago
Major code refactor with retro-compatibility
Add logging support
Add full mkdocs documentation including usage notebook (
https://github.com/a-slide/NanoCount/issues/2
)
Fix TPM normalisation (
https://github.com/a-slide/NanoCount/issues/3
)
Fix division by zero error (
https://github.com/a-slide/NanoCount/issues/5
)
Add option to extract all transcript + length from BAM header and report in output file (
https://github.com/a-slide/NanoCount/issues/1
)
Add conda packaging
Add travis continuous integration and deployment
Add auto CLI