Missing submodule CpG_Aggregate

[DrownedMala]

Hello, I'm opening this issue because I was trying to use pycoMeth to visualize nanopolish's methylation analysis output, following the guidelines provided here, but I could not find the aforementioned submodule when launching pycoMeth. We installed pycoMeth with conda install -c snajder-r pycometh, as suggested here .

This is the output of pycoMeth -h:

Cannot import dependencies required for static image export
usage: pycoMeth [-h] [--version]
                {Meth_Comp,Comp_Report,CGI_Finder,Meth_Seg} ...

Differential methylation calling suite for Nanopore methylation calls PycoMeth

optional arguments:
  -h, --help            show this help message and exit
  --version             show program's version number and exit

subcommands:
  pycoMeth implements the following subcommands

  {Meth_Comp,Comp_Report,CGI_Finder,Meth_Seg}

Is it normal for that particular submodule to be missing?

Also, what is the meaning of the line Cannot import dependencies required for static image export?

Thanks a lot in advance for any reply, Have a good day, Simone.

[DrownedMala]

So, I found this installation procedure too, which seems to be the proper one, with CpG_Aggregate.

[a-slide]

This version is deprecated see Rene Snajder fork at the following URL https://github.com/snajder-r/pycoMeth