seeking help on pycoqc output

a-slide / pycoQC

pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)

https://a-slide.github.io/pycoQC/

GNU General Public License v3.0

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seeking help on pycoqc output #140

Open rezarahman12 opened 1 year ago

rezarahman12 commented 1 year ago

Dear pycoQC developer team. Thanks for building this nice tool. My problem is not an issue rather a help on the output file obtained through pycoqc.

I generated html file through pycoqc with below command-

pycoQC -f sequencing_summary.txt -a aligned.bam -o Ctrl1_pycoQC_output.html

However, I can't not open the HTML file in Firefox and Google chrome. Could you please tell me a way to open HTML file in browser?

Best regards Reza

Add any other context about the problem here.

ibimanji commented 11 months ago

I have the same question. I think it may due to the file is too large but I don't know how to deal with it. Have you solved the question now? Thanks in advance.