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aCLImatise / CliHelpParser

Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
https://aclimatise.github.io/CliHelpParser/
GNU General Public License v3.0
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missing dependencies #35

Open bernt-matthias opened 4 years ago

bernt-matthias commented 4 years ago

Was just trying to continue and needed to setup again. After this some modules were still missing: 

pip install python-json-logger
pip install pygtail
pip install lark

still I get

AttributeError: module 'lark' has no attribute 'Tree'

Maybe more modules are missing in setup.py?

multimeric commented 4 years ago

It's lark-parser, not lark Is that not in the dependencies?

multimeric commented 4 years ago

Oh, yes I'm not using lark in the actual codebase. I guess this is to do with miniwdl causing conflicts? Consider recreating your virtualenv/conda environment and/or updating all packages to their latest version, because they recently merged my miniWDL PR to make it more permissive.

multimeric commented 4 years ago

Any update on this?