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aaranyue / quarTeT

A telomere-to-telomere toolkit for gap-free genome assembly and centromeric repeat identification
http://atcgn.com:8080/quarTeT/home.html
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Input genome does not have valid gap #37

Closed yghyghyghyghygh closed 1 month ago

yghyghyghyghygh commented 1 month ago

你好，使用GapFiller模块提示" Input genome does not have valid gap",需要填充的gap的draft genomes是由wtdbg2组装的，-g数据是fastq转换成的fasta。这种问题改怎么解决，谢谢。 QQ图片20240602214939

Echoring commented 1 month ago

该模块默认将>100个N识别为gap，如果draft genome组装软件输出的gap表示方法不同，便可能出现该错误，请检查draft genome。

yghyghyghyghygh commented 1 month ago

好的，谢谢帮助