FileNotFoundError: [Errno 2] No such file or directory: 'tmp/sx_tm.txt'

[HaoWenhy]

Hello, thank you very much for developing this software, which can help me solve some problems. I want to identify telomere sequence information through linux commands, but in the process of my use, according to the parameter Settings, the running time will always report an error, I do not know how to solve. How should this be resolved? Looking forward to your reply. Thank you.

[Echoring]

This happened most likely that tidk explore failed. Make sure that tidk is accessable in $PATH. Also make sure that the version is below the newest 0.2.31. This version updated after our program design and make great changes in tidk explore module. quarTeT currently do not support it. Please use version 0.2.1 instead.

(Meanwhile, you can edit the issue instead of close it and open a new one)

[HaoWenhy]

        Thank you very much, I just checked my tidk, it is indeed version 0.2.31, I will give it a lower version and try again.

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    7/3/2023 16:52

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          Re: [aaranyue/quarTeT] FileNotFoundError: [Errno 2] No such file or directory: 'tmp/sx_tm.txt' (Issue #5)

This happened most likely that tidk explore failed. Make sure that tidk is accessable in $PATH. Also make sure that the version is below the newest 0.2.31. This version updated after our program design and make great changes in tidk explore module. quarTeT currently do not support it. Please use version 0.2.1 instead.

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[HaoWenhy]

Hello, after yesterday's guidance to downgrade tidk, I successfully identified its telomeres and centromere, and there were corresponding results, but no.png format picture appeared, and no error information was reported, I don't know why, so I would like to consult you again! thank you

[Echoring]

This may due to an error of R. Was R package RIdeogram successfully installed in the R in $PATH? Or is there large amount of gaps (>100) exist in the genome? (and what's your version of quarTeT? I remembered I have add a warning when figure drawing is failed in v1.0.3)

[HaoWenhy]

    oh, my quarTeT was v1.0.2, so didn't see any information about graph drawing failures

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    7/4/2023 09:16

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          Re: [aaranyue/quarTeT] FileNotFoundError: [Errno 2] No such file or directory: 'tmp/sx_tm.txt' (Issue #5)

This may due to an error of R. Was R package RIdeogram successfully installed in the R in $PATH? Or is there large amount of gaps (>100) exist in the genome? (and what's your version of quarTeT? I remembered I have add a warning when figure drawing is failed in v1.0.3)

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