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aaronchrist / RLKI-Geolocator

various bits n bobs for coding
GNU General Public License v3.0
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Overlap code for comparing distributions between colonies #2

Open briedrummond opened 5 years ago

briedrummond commented 5 years ago

Get any code that already exists for looking at spatial overlap that we can tweak for intercolony comparisons

raorben commented 5 years ago

I added a run script and the function for iteratively assessing kernel densities between two groups. Codes need modification to run with the new dataset. Output figures should be modified as well.

For variations on methods see: Bogdanova, M. I., Butler, A., Wanless, S., Moe, B., Anker-Nilssen, T., Frederiksen, M., et al. (2017). Multi-colony tracking reveals spatio-temporal variation in carry-over effects between breeding success and winter movements in a pelagic seabird. Marine Ecology Progress Series, 578, 167–181. http://doi.org/10.3354/meps12096

Breed, G. A., Bowen, W. D., McMillan, J. I., & Leonard, M. L. (2006). Sexual segregation of seasonal foraging habitats in a non-migratory marine mammal. Proceedings of the Royal Society B: Biological Sciences, 273(1599), 2319–2326. http://doi.org/10.2307/1542461

Orben, R. A., Kokubun, N., Fleishman, A. B., Will, A. P., Yamamoto, T., Shaffer, S. A., et al. (2018). Persistent annual migration patterns of a specialist seabird. Marine Ecology Progress Series, 593, 231–245. http://doi.org/10.3354/meps12459