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aarpon / hrm

The Huygens Remote Manager is an open-source, efficient, multi-user web-based interface to the Huygens software by Scientific Volume Imaging for parallel batch deconvolutions.
http://huygens-rm.org
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OMERO import: attach parameters.txt and log.txt as FileAnnotation #3

Open sukunis opened 5 years ago

sukunis commented 5 years ago

Dear Aaron,

how it works: to get the ID of the imported image i parse the output of the cli.invoke command. After a reconnection (cli.invoke seems to cut the connection after excecution) i attach the files to this object.

Regards Susanne

ehrenfeu commented 5 years ago

Dear @sukunis,

thanks a lot for your PR! This is something I had on my own list of improvements, but I never got around to really work on it. As you could see from the comments this had been stuck initially for some lack of information from OMERO, but this has been fixed a while ago upstream.

The other thing I had been thinking about is to actually parse the HRM output and place the results into OMERO.tables or key-value pairs...

I will look into your PR more detailed hopefully later this month, unfortunately my schedule is terribly busy at the minute. So please be patient with me!

Best, Niko