Closed pierrebarbera closed 4 years ago
Placement is done against a reference tree/alignment of the polymerase gene. Uses hmmsearch to identify which ORF sequences are polymerase seqeunces. Uses gappa examine assign to assign taxonomy to contigs based on their placement.
hmmsearch
Placement is done against a reference tree/alignment of the polymerase gene. Uses
hmmsearch
to identify which ORF sequences are polymerase seqeunces. Uses gappa examine assign to assign taxonomy to contigs based on their placement.