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abacus-gene / paml

PAML is a program package for model fitting and phylogenetic tree reconstruction using DNA and protein sequence data. Please report only **technical issues** on this repository (e.g., compiling, programs abort or do not run at all, etc.). Problems with input data and general questions should be posted at https://groups.google.com/g/pamlsoftware?pli
GNU General Public License v3.0
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help！my mcmctree doesn't work！ #15

Closed vincentkaiheng closed 2 years ago

vincentkaiheng commented 2 years ago

When I use mcmctree to analyze the protein sequence, when I import in.BV, I get an error: error strange calibration. May I ask where is the problem? I have been modifying the tree file for several days.

ziheng-yang commented 2 years ago

"error strange calibration" means something is wrong with your calibration in the tree file. for example if the age is between 6 and 8 myrs you should specify ">0.06<0.08", and you will get that error message if you specify "<0.06>0.08". can you try the example in the examples/DateSoftBound folder and see whether the program runs. ziheng

vincentkaiheng commented 2 years ago

Thank you very much!十分感谢杨教授！