PAML is a program package for model fitting and phylogenetic tree reconstruction using DNA and protein sequence data. Please report only **technical issues** on this repository (e.g., compiling, programs abort or do not run at all, etc.). Problems with input data and general questions should be posted at https://groups.google.com/g/pamlsoftware?pli
Hi, I am using codeml and calculated the dN/dS of an alignment with a user tree. How do I get the root-to-tip parameters for all the tips ? Thank you