I faced some problems when compiling elpa with toolchain on a cluster.
The error information is as bellow:
make[1]: [src/elpa2/kernels/libelpa_openmp_private_la-real_simple_block4.lo] Error 1
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(160): error #6683: A kind type parameter must be a compile-time constant. [IK]
integer(kind=ik) :: thread_cpu_id
-----------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(161): error #6683: A kind type parameter must be a compile-time constant. [IK]
integer(kind=ik) :: i, actuall_num
-----------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(184): error #6683: A kind type parameter must be a compile-time constant. [IK]
integer(kind=ik) :: i
-----------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(185): error #6683: A kind type parameter must be a compile-time constant. [IK]
integer(kind=ik), intent(in) :: mype
-----------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(186): error #6683: A kind type parameter must be a compile-time constant. [IK]
integer(kind=ik) :: pid, ppid
-----------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(104): error #6683: A kind type parameter must be a compile-time constant. [IK]
cpu_id = int(cpu_id_c, kind=ik)
--------------------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(104): warning #7319: This argument's data type is incompatible with this intrinsic procedure; procedure assumed EXTERNAL. [INT]
cpu_id = int(cpu_id_c, kind=ik)
--------------------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(104): error #6404: This name does not have a type, and must have an explicit type. [INT]
cpu_id = int(cpu_id_c, kind=ik)
-------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(112): error #6683: A kind type parameter must be a compile-time constant. [IK]
cpu_id = int(cpu_id_c, kind=ik)
--------------------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(112): warning #7319: This argument's data type is incompatible with this intrinsic procedure; procedure assumed EXTERNAL. [INT]
cpu_id = int(cpu_id_c, kind=ik)
--------------------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(112): error #6404: This name does not have a type, and must have an explicit type. [INT]
cpu_id = int(cpu_id_c, kind=ik)
-------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(120): error #6683: A kind type parameter must be a compile-time constant. [IK]
process_id = int(process_id_c, kind=ik)
------------------------------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(120): warning #7319: This argument's data type is incompatible with this intrinsic procedure; procedure assumed EXTERNAL. [INT]
process_id = int(process_id_c, kind=ik)
------------------------------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(120): error #6404: This name does not have a type, and must have an explicit type. [INT]
process_id = int(process_id_c, kind=ik)
------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(121): error #6632: Keyword arguments are invalid without an explicit interface. [KIND]
pprocess_id = int(pprocess_id_c, kind=ik)
-------------------------------------^
manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(121): error #6404: This name does not have a type, and must have an explicit type. [IK]
pprocess_id = int(pprocess_id_c, kind=ik)
------------------------------------------^
make[1]: [src/elpa2/kernels/libelpa_openmp_private_la-real_simple_block6.lo] Error 1
compilation aborted for manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90 (code 1)
Traceback (most recent call last):
File "/scratch/guest/gst23-23/test/abacus-develop/toolchain/build/elpa-2023.05.001/build_cpu/../manual_cpp", line 64, in
check_call(args + [tmp_filename])
File "/scratch/guest/gst23-23/test/abacus-develop/toolchain/build/elpa-2023.05.001/build_cpu/../manual_cpp", line 18, in check_call
return subprocess.check_call(args, kwargs)
File "/opt/intel-2022/oneapi/intelpython/latest/lib/python3.9/subprocess.py", line 373, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['/scratch/opt/intel-2022/oneapi/mpi/2021.5.0/bin/mpiifort', '-DHAVE_CONFIG_H', '-I.', '-I..', '-module', 'private_modules', '-Imodules', '-Iprivate_modules', '-O2', '-fPIC', '-fp-model=precise', '-funroll-loops', '-g', '-qopenmp', '-qopenmp-simd', '-traceback', '-xHost', '-m64', '-I/scratch/opt/intel-2022/oneapi/mkl/2022.0.1/include', '-I/scratch/opt/intel-2022/oneapi/mkl/2022.0.1/include/fftw', '-ffree-line-length-none', '-mavx2', '-mfma', '-msse4', '-fno-lto', '-c', '-fPIC', '-o', 'src/helpers/.libs/libelpa_openmp_private_la-mod_thread_affinity.o', 'manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90']' returned non-zero exit status 1.
make[1]: ** [src/helpers/libelpa_openmp_private_la-mod_thread_affinity.lo] Error 1
mv: cannot move '.Tpo' to '.Plo': No such file or directory
make[1]: [src/elpa2/kernels/real_avx_2hv_double_precision.lo] Error 1
The cpu is Intel(R) Xeon(R) CPU E5-2680 v3 with intel oneapi 2022.1 and gcc-9.4.0.
Does anyone know how to fix it?
Details
Dear developers and users,
I faced some problems when compiling elpa with toolchain on a cluster. The error information is as bellow:
make[1]: [src/elpa2/kernels/libelpa_openmp_private_la-real_simple_block4.lo] Error 1 manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(160): error #6683: A kind type parameter must be a compile-time constant. [IK] integer(kind=ik) :: thread_cpu_id -----------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(161): error #6683: A kind type parameter must be a compile-time constant. [IK] integer(kind=ik) :: i, actuall_num -----------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(184): error #6683: A kind type parameter must be a compile-time constant. [IK] integer(kind=ik) :: i -----------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(185): error #6683: A kind type parameter must be a compile-time constant. [IK] integer(kind=ik), intent(in) :: mype -----------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(186): error #6683: A kind type parameter must be a compile-time constant. [IK] integer(kind=ik) :: pid, ppid -----------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(104): error #6683: A kind type parameter must be a compile-time constant. [IK] cpu_id = int(cpu_id_c, kind=ik) --------------------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(104): warning #7319: This argument's data type is incompatible with this intrinsic procedure; procedure assumed EXTERNAL. [INT] cpu_id = int(cpu_id_c, kind=ik) --------------------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(104): error #6404: This name does not have a type, and must have an explicit type. [INT] cpu_id = int(cpu_id_c, kind=ik) -------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(112): error #6683: A kind type parameter must be a compile-time constant. [IK] cpu_id = int(cpu_id_c, kind=ik) --------------------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(112): warning #7319: This argument's data type is incompatible with this intrinsic procedure; procedure assumed EXTERNAL. [INT] cpu_id = int(cpu_id_c, kind=ik) --------------------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(112): error #6404: This name does not have a type, and must have an explicit type. [INT] cpu_id = int(cpu_id_c, kind=ik) -------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(120): error #6683: A kind type parameter must be a compile-time constant. [IK] process_id = int(process_id_c, kind=ik) ------------------------------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(120): warning #7319: This argument's data type is incompatible with this intrinsic procedure; procedure assumed EXTERNAL. [INT] process_id = int(process_id_c, kind=ik) ------------------------------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(120): error #6404: This name does not have a type, and must have an explicit type. [INT] process_id = int(process_id_c, kind=ik) ------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(121): error #6632: Keyword arguments are invalid without an explicit interface. [KIND] pprocess_id = int(pprocess_id_c, kind=ik) -------------------------------------^ manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90(121): error #6404: This name does not have a type, and must have an explicit type. [IK] pprocess_id = int(pprocess_id_c, kind=ik) ------------------------------------------^ make[1]: [src/elpa2/kernels/libelpa_openmp_private_la-real_simple_block6.lo] Error 1 compilation aborted for manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90 (code 1) Traceback (most recent call last): File "/scratch/guest/gst23-23/test/abacus-develop/toolchain/build/elpa-2023.05.001/build_cpu/../manual_cpp", line 64, in
check_call(args + [tmp_filename])
File "/scratch/guest/gst23-23/test/abacus-develop/toolchain/build/elpa-2023.05.001/build_cpu/../manual_cpp", line 18, in check_call
return subprocess.check_call(args, kwargs)
File "/opt/intel-2022/oneapi/intelpython/latest/lib/python3.9/subprocess.py", line 373, in check_call
raise CalledProcessError(retcode, cmd)
subprocess.CalledProcessError: Command '['/scratch/opt/intel-2022/oneapi/mpi/2021.5.0/bin/mpiifort', '-DHAVE_CONFIG_H', '-I.', '-I..', '-module', 'private_modules', '-Imodules', '-Iprivate_modules', '-O2', '-fPIC', '-fp-model=precise', '-funroll-loops', '-g', '-qopenmp', '-qopenmp-simd', '-traceback', '-xHost', '-m64', '-I/scratch/opt/intel-2022/oneapi/mkl/2022.0.1/include', '-I/scratch/opt/intel-2022/oneapi/mkl/2022.0.1/include/fftw', '-ffree-line-length-none', '-mavx2', '-mfma', '-msse4', '-fno-lto', '-c', '-fPIC', '-o', 'src/helpers/.libs/libelpa_openmp_private_la-mod_thread_affinity.o', 'manuallypreprocessed.._src_helpers_mod_thread_affinity.F90-srchelpers.libs_libelpa_openmp_private_la-mod_thread_affinity.o.F90']' returned non-zero exit status 1.
make[1]: ** [src/helpers/libelpa_openmp_private_la-mod_thread_affinity.lo] Error 1
mv: cannot move '.Tpo' to '.Plo': No such file or directory
make[1]: [src/elpa2/kernels/real_avx_2hv_double_precision.lo] Error 1
The cpu is Intel(R) Xeon(R) CPU E5-2680 v3 with intel oneapi 2022.1 and gcc-9.4.0. Does anyone know how to fix it?
Sincerely
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