search

abaizan / kodoja

Kodoja: identifying viruses from plant RNA sequencing data
MIT License
7 stars 6 forks source link

only output FASTA/FASTQ from kodoja_retrieve.py #27

Closed peterjc closed 6 years ago

peterjc commented 6 years ago

With this change kodoja_retrieve.py no longer bothers to create subset_files/virus_all_sequences1.txt and subset_files/virus_all_sequences2.txt

I don't personally see any use for these files (and also it was redundant to re-parse the text file immediately after writing it, but that could be fixed without dropping the output file completely)

peterjc commented 6 years ago

Discussed by email, merging.