Range query API

[GarrettNg]

Partially implemented (some may already be implemented)

• [ ] alignments:
  • [ ] sam.gz:
    • [ ] tbi
    • [ ] csi
  • [ ] bam: bai/csi
    • [x] bai
    • [ ] tbi
    • [ ] csi
  • [ ] cram
    • [ ] tbi
    • [x] csi
• [ ] variants:
  • [ ] vcf
    • [x] tbi
    • [ ] csi
  • [ ] bcf
    • [ ] tbi
    • [x] csi
• [ ] sequences: fasta, fastq
  • [ ] fasta.gz
    • [x] fai (fasta, uncompressed)
    • [] gzi (compressed)
  • [ ] fastq.gz
    • [x] fai (fastq, uncompressed)
    • [ ] gzi (compressed)
• [ ] interval feature
  • [ ] bed.gz
  • [ ] bedGraph.gz
  • [ ] gtf.gz/gff.gz
  • [ ] Arbitrary TSV files with tabix