It would be great if read_bam worked without a BAM index (provided you're not doing a region query). My use case: Oxford Nanopore's Dorado basecaller outputs basecalled reads in BAM format (where all the alignment fields are null in the BAM), so I want to read them, but there's no point in indexing them.
It would be great if read_bam worked without a BAM index (provided you're not doing a region query). My use case: Oxford Nanopore's Dorado basecaller outputs basecalled reads in BAM format (where all the alignment fields are null in the BAM), so I want to read them, but there's no point in indexing them.