Bump the production-dependencies group across 1 directory with 3 updates

[dependabot[bot]]

Bumps the production-dependencies group with 3 updates in the / directory: matplotlib, pyside6 and shapely.

Updates matplotlib from 3.8.3 to 3.9.0

Release notes

Sourced from matplotlib's releases.

REL: 3.9.0

Highlights of this release include:

• Plotting and Annotation improvements
  • Axes.inset_axes is no longer experimental
  • Legend support for Boxplot
  • Percent sign in pie labels auto-escaped with usetex=True
  • hatch parameter for stackplot
  • Add option to plot only one half of violin plot
  • axhline and axhspan on polar axes
  • Subplot titles can now be automatically aligned
  • axisartist can now be used together with standard Formatters
  • Toggle minorticks on Axis
  • StrMethodFormatter now respects axes.unicode_minus
• Figure, Axes, and Legend Layout
  • Subfigures now have controllable zorders
  • Getters for xmargin, ymargin and zmargin
• Mathtext improvements
  • mathtext documentation improvements
  • mathtext spacing corrections
• Widget Improvements
  • Check and Radio Button widgets support clearing
• 3D plotting improvements
  • Setting 3D axis limits now set the limits exactly
• Other improvements
  • New BackendRegistry for plotting backends
  • Add widths, heights and angles setter to EllipseCollection
  • image.interpolation_stage rcParam
  • Arrow patch position is now modifiable
  • NonUniformImage now has mouseover support

REL: v3.9.0rc2

This is the second release candidate for the meso release 3.9.0.

REL: v3.8.4

This is the fourth micro release of the 3.8 series.

Highlights of the 3.8.4 release include:

• Enable building against numpy 2.0; released wheels are built against numpy 2
• macosx: Clean up single-shot timers correctly
• Add a draw during show for macos backend
• Fix color sequence data for Set2 and Set3
• gtk: Ensure pending draws are done before GTK draw
• Update "Created with" url in hand.svg
• Avoid modifying user input to Axes.bar
• fix quiver3d incorrect arrow colors

Commits

• be56634 REL: v3.9.0
• 846ce8a DOC: Finish documentation for 3.9.0
• 8604f67 Merge pull request #28206 from meeseeksmachine/auto-backport-of-pr-28205-on-v...
• 196c8db TST: Followup corrections to #28205
• d8f3016 Backport PR #28205: TST: Fix tests with older versions of ipython
• 4db5ac9 Merge pull request #28203 from QuLogic/auto-backport-of-pr-28164-on-v3.9.x
• ef1a2db Merge pull request #28204 from meeseeksmachine/auto-backport-of-pr-28195-on-v...
• e4384b8 Merge pull request #28191 from QuLogic/no-dev-theme
• 3b65546 Backport PR #28195: TST: Prepare for pytest 9
• 1b526c3 Backport PR #28164: CI: Ensure code coverage is always uploaded
• Additional commits viewable in compare view

Updates pyside6 from 6.6.2 to 6.7.0

Updates shapely from 2.0.3 to 2.0.4

Release notes

Sourced from shapely's releases.

2.0.4

Wheels for Python versions >= 3.9 will be compatible with the upcoming NumPy 2.0 release (as well as with supported NumPy 1.x versions).

Bug fixes:

• Fix bug in to_wkt with multiple empty Z geometries (#2012).
• Fix bug in to_ragged_array for an array of Points with missing values (#2034).

For a full changelog, see https://shapely.readthedocs.io/en/latest/release/2.x.html#version-2-0-4

Changelog

Sourced from shapely's changelog.

2.0.4 (2024-04-16)

Wheels for Python versions >= 3.9 will be compatible with the upcoming NumPy 2.0 release (as well as with supported NumPy 1.x versions).

Bug fixes:

• Fix bug in to_wkt with multiple empty Z geometries (#2012).
• Fix bug in to_ragged_array for an array of Points with missing values (#2034).

Commits

• 3853e11 RLS: 2.0.4
• 083bdcc DOC/RLS: starts changelog for 2.0.4 (#2036)
• 23f462e BUG: fix to_ragged_array for Points with missing values (#2034)
• cf18461 BLD: build linux aarch64 wheels (circleci) with numpy rc as well
• 374446f BLD: update build-system requires to use latest numpy instead of oldest-suppo...
• 2b565f4 Add shapely.geometry.polygon.orient to all (#2003)
• 5976300 FIX: to_wkt with empty Z geometry arrays (#2012)
• See full diff in compare view

Dependabot will resolve any conflicts with this PR as long as you don't alter it yourself. You can also trigger a rebase manually by commenting @dependabot rebase.

---

Dependabot commands and options

You can trigger Dependabot actions by commenting on this PR: - `@dependabot rebase` will rebase this PR - `@dependabot recreate` will recreate this PR, overwriting any edits that have been made to it - `@dependabot merge` will merge this PR after your CI passes on it - `@dependabot squash and merge` will squash and merge this PR after your CI passes on it - `@dependabot cancel merge` will cancel a previously requested merge and block automerging - `@dependabot reopen` will reopen this PR if it is closed - `@dependabot close` will close this PR and stop Dependabot recreating it. You can achieve the same result by closing it manually - `@dependabot show ignore conditions` will show all of the ignore conditions of the specified dependency - `@dependabot ignore major version` will close this group update PR and stop Dependabot creating any more for the specific dependency's major version (unless you unignore this specific dependency's major version or upgrade to it yourself) - `@dependabot ignore minor version` will close this group update PR and stop Dependabot creating any more for the specific dependency's minor version (unless you unignore this specific dependency's minor version or upgrade to it yourself) - `@dependabot ignore ` will close this group update PR and stop Dependabot creating any more for the specific dependency (unless you unignore this specific dependency or upgrade to it yourself) - `@dependabot unignore ` will remove all of the ignore conditions of the specified dependency - `@dependabot unignore ` will remove the ignore condition of the specified dependency and ignore conditions

[dependabot[bot]]

Superseded by #453.