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abims-sbr / adaptsearch

A pipeline for the search of adaptive mutations and positively selected genes from RNASeq orthologs
http://www.sb-roscoff.fr/fr/equipe-adaptation-et-biologie-des-invertebres-en-conditions-extremes
GNU General Public License v3.0
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No more zip #16

Closed lecorguille closed 7 years ago

lecorguille commented 7 years ago
lecorguille commented 7 years ago

@Mataivic I have skipped MutCount because we don't have any test for the "separated" method (See: https://github.com/abims-sbr/adaptsearch/issues/18). I will integrate it in an other branch and PR.

Although, please, can you review this PR (and approve it or comment it)? Actually, this review will prove that you were aware of what I have done ... for quality purposes.

All tools are now in 2.0

As soon as I will be able to merge this branch on the dev one, I will review all the indentations, syntax ... I didn't want to do that at once with the zip stuff because I wanted to keep readable changes in this importante PR (at least, I tried).

Mataivic commented 7 years ago

@lecorguille Great, I plan to start working on that as soon as I come back (tomorrow - and maybe this evening).