search

ablab / rnaquast

Quality assessment of de novo transcriptome assemblies from RNA-Seq data
http://cab.spbu.ru/software/rnaquast
Other
19 stars 6 forks source link

python3 #2

Closed Zethson closed 4 years ago

Zethson commented 5 years ago

Hi,

python2 is EOL. I would like to kindly request a python 3 version.

andrewprzh commented 4 years ago

Hi

Took us some time to get back to this project. Finally, python3 support https://github.com/ablab/rnaquast/releases/tag/v.2.0.0

jowodo commented 2 years ago

Hi,

sorry for highjacking this issue. In (some) modern linux versions, there is no python executable, but rather python3. 

/bin/sh: python: command not found

I changed it in the rnaQUAST.py executable with: 

sed -i "s/env python/env python3/" rnaQUAST.py
sed -i "s/python /python3 /" general/UtilsPipeline.py

Thanks :)

andrewprzh commented 2 years ago

Hi!

Thanks a lot for the notice. Unfortunately, some servers still use python2 :/ However, I think we will remove python2 support at some point.

Best Andrey