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ablab / spades

SPAdes Genome Assembler
http://ablab.github.io/spades/
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SPAdes 4.0.0 incorrect Python version detection? #1319

Closed Kroh-N closed 1 week ago

Kroh-N commented 1 week ago

Description of bug

SPAdes 4.0.0 reports an error when trying to run spades.py or metaspades.py:

== Error ==  
Python version 3.6.8 is not supported!
Minimal supported version is 3.8

My current Python version is Python 3.9.13 though

Any hint how to resolve would be appreciated

spades.log

spades.log

params.txt

params.txt

SPAdes version

SPAdes 4.0.0

Operating System

AlmaLinux 8.9

Python Version

Python 3.9.13

Method of SPAdes installation

manual

No errors reported in spades.log

asl commented 1 week ago

What is the output of /usr/bin/env python3 --version for you?

Kroh-N commented 1 week ago

It was Python 3.6.x but now is Python 3.9.13

After a number of restarts SPAdes is now working - I do not really know why, but thanks for the rapid reply! All the best!