Hi
The program shows strange characters ('zu') for RAM and 'Max number of
representatives'. Please see the log below.
What ca cause this?
Is it a bug?
================================================================
Program: CD-HIT, V4.6, Sep 01 2014, 17:43:15
Command: cdhitest.exe -l 10 -c
0.9 -n 7 -g 1 -r 0 -G 1 -B 0 -M 1024 -T 0 -d 20 -p 1
-b 20 -t 2 -i
c:\MyProjects\Biology\CDHit\output corect\0250K.fasta
-o out.fasta
================================================================
Output
----------------------------------------------------------------
Option -T is ignored: multi-threading with OpenMP is NOT enabled!
total seq: 1404
longest and shortest : 438 and 50
Total letters: 209001
Sequences have been sorted
Approximated minimal memory consumption:
Sequence : zuM
Buffer : 1 X zuM = zuM
Table : 1 X zuM = zuM
Miscellaneous : zuM
Total : zuM
Table limit with the given memory limit:
Max number of representatives: zu
Max number of word counting entries: zu
comparing sequences from 0 to 1404
.
1404 finished 1401 clusters
Apprixmated maximum memory consumption: 14M
writing new database
writing clustering information
program completed !
Total CPU time 0.12
Original issue reported on code.google.com by CubicDes...@gmail.com on 3 Sep 2014 at 11:44
Original issue reported on code.google.com by
CubicDes...@gmail.com
on 3 Sep 2014 at 11:44