Open jlcdaluz opened 2 months ago
It looks like you are calling everything correctly. Are you able to share your mzML file?
There is a unit test
com.digitalproteomics.oss.parsers.mzml.MzMLChromatogramStAXParserTest
that shows the chromatogram parsing is working with small.pviz.1.1.mzML
, which is found in the src/main/resources
directory. The chromatogram list is similar, as shown here:
Hello Digital Proteomics team,
I would like to ask about the MzMLChromatogramStAXParser. I am currently trying to parse through Chromatogram tags with the dp-mzml library, however, I keep getting null values whenever I use the MzMLChromatogramStAXParser. I tried implementing the MzMLChromatogramStAXParser using the code below.
However, whenever I try to run this code, I only get the following message in my log files:
I don't think the issue is caused by the file I am using since it contains chromatogram tags that are being used by the code, as seen in the image below.
If there is anything wrong with how I am creating the parser, please let me know. Your help would be greatly appreciated. Thank you, and I look forward to your response.