abyzovlab / CNVnator

a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads
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is the docker published by the author? #218

Closed worker000000 closed 3 years ago

worker000000 commented 4 years ago

hi, thanks for making such a poweful tool, due to the install is too hard, I tried to find a docker vesion, but in the github, you never mentioned this, so does diploid/cnvnator made by you, if so, is there any guide tell me how to use, docker pull diploid/cnvnator thanks a lot

suvakov commented 4 years ago

No, none of existing docker images were made by Abyzov lab. You can find Dockerfile in the repository made by external contributor @nathanweeks. We are switching development to CNVpytor, Python impemented successor of CNVnator. We expect docker image for CNVpytor soon. You can follow the progress on CNVpytor Github page.