abyzovlab / CNVnator

a tool for CNV discovery and genotyping from depth-of-coverage by mapped reads
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the batch_size for nanopore data #257

Open mantonglaw opened 2 years ago

mantonglaw commented 2 years ago

Hi! I try to run CNVnator to call CNV for WGS data from nanopore sequencing. The process was successful. However, I don't know how much bin_size is suitable for nanopore-seq data. The coverage of my data is 30× and the species is Homo. Could you give me some suggetstions? Thanks in advance!