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acbull / pyHGT

Code for "Heterogeneous Graph Transformer" (WWW'20), which is based on pytorch_geometric
MIT License
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IndexError about result #37

Open githublx1997 opened 3 years ago

githublx1997 commented 3 years ago

Traceback (most recent call last): File "train_paper_field.py", line 242, in node_rep = gnn.forward(node_feature.to(device), node_type.to(device), edge_time.to(device), edge_index.to(device), edge_type.to(device)) File "/home/liangxiao/pyHGT/OAG/pyHGT/model.py", line 79, in forward meta_xs = gc(meta_xs, node_type, edge_index, edge_type, edge_time) File "/home/liangxiao/anaconda3/envs/pyhgt/lib/python3.7/site-packages/torch/nn/modules/module.py", line 532, in call result = self.forward(*input, *kwargs) File "/home/liangxiao/pyHGT/OAG/pyHGT/conv.py", line 317, in forward return self.base_conv(meta_xs, node_type, edge_index, edge_type, edge_time) File "/home/liangxiao/anaconda3/envs/pyhgt/lib/python3.7/site-packages/torch/nn/modules/module.py", line 532, in call result = self.forward(input, **kwargs) File "/home/liangxiao/pyHGT/OAG/pyHGT/conv.py", line 58, in forward edge_type=edge_type, edge_time = edge_time) File "/home/liangxiao/anaconda3/envs/pyhgt/lib/python3.7/site-packages/torch_geometric/nn/conv/message_passing.py", line 234, in propagate kwargs) File "/home/liangxiao/anaconda3/envs/pyhgt/lib/python3.7/site-packages/torch_geometric/nn/conv/message_passing.py", line 156, in collect self.set_size(size, dim, data) File "/home/liangxiao/anaconda3/envs/pyhgt/lib/python3.7/site-packages/torch_geometric/nn/conv/message_passing.py", line 118, in set_size size[dim] = src.size(self.node_dim) IndexError: Dimension out of range (expected to be in range of [-1, 0], but got -2)

why do I have this error ? Is there anything wrong with my pyg version or anything else?(I use the new version)

githublx1997 commented 3 years ago

I have solved this problem by changing the pyg version to 1.4.3，it seems the _scatter had been overwritting after 1.4.3 version

Juicechen95 commented 3 years ago

I also met this problem. Unfortunately, I can not change pyg version to 1.4.3 for some reason. Is there any other idea to solve this problem? For example , how should I change the code to fit the higher pyg version?

rainman503 commented 3 years ago

I have solved this problem by changing the pyg version to 1.4.3，it seems the _scatter had been overwritting after 1.4.3 version

Do you mean the version of pytorch-geometric?