I modified config setting get_dicom_info and specified an invalid path (i.e script does not exists). I ran tarchiveLoader and got this output:
uploadNeuroDB/tarchiveLoader.pl -v -profile prod -uploadID 62 2018/DCM_2018-04-20_ImagingUpload-13-42-zcoZR0.tar
md5sum /data-raisinbread/tarchive/2018/DCM_2018-04-20_ImagingUpload-13-42-zcoZR0.tar
PSCID is: DCC090
CandID id: 587630
visit_label is: V1
PSCID is: DCC090
CandID id: 587630
visit_label is: V1
PSCID is: DCC090
CandID id: 587630
visit_label is: V1
PSCID is: DCC090
CandID id: 587630
visit_label is: V1
sh: 1: /tata/coco/p.pl: not found
find: ‘standard output’: Broken pipe
find: write error
Number of MINC files that will be considered for inserting into the database: 0
No data could be converted into valid MINC files.
localizer, scout will not be considered!
It should be more obvious that tarchiveLoader failed because config setting get_dicom_info is invalid.
I modified config setting
get_dicom_info
and specified an invalid path (i.e script does not exists). I rantarchiveLoader
and got this output:It should be more obvious that
tarchiveLoader
failed because config settingget_dicom_info
is invalid.