Closed jeffersoncasimir closed 1 year ago
@jeffersoncasimir what are the permissions of those files on the filesystem? Can they be read by apache? Are they located on the filesystem and can you open them outside of LORIS?
@cmadjar I just changed ownership to lorisadmin:www-data and tried without success with 777 permissions. The .nii files are on the filesystem and I downloaded one (using scp; 404 with download button) and I am able to view it and interact with it using this: https://socr.umich.edu/HTML5/BrainViewer/
I ran the same dataset with the test-25 VM and it works as expected. It appears to be an issue with my other VMs environment.
Please close this if you think it is no longer relevant.
While testing
bids_import.py
(#923), I encountered an issue with MRI.I imported this dataset and it ran without errors. However, the following warning appeared:
/opt/eegnet/bin/mri/python_virtualenvs/loris-mri-python/lib/python3.6/site-packages/nilearn/image/resampling.py:531: UserWarning: Casting data from int32 to float32 warnings.warn("Casting data from %s to %s" % (data.dtype.name, aux))
After selecting
native
for example from the session browser, the session viewer loads with broken thumbnails, shown belowWhen clicking a thumbnail, it loads
/brainbrowser/?minc_id=[:id]
and shows the message below:There are no errors in the server log either.