Closed zaliqarosli closed 3 months ago
./sub-300125/ses-V1/func/sub-300125_ses-V1_task-rest_run-1_bold.json Evidence: .EffectiveEchoSpacing should be number
{
"TaskName": "rest",
"SequenceVariant": "SK ",
"Modality": "MRI__ ",
"SoftwareVersions": "syngo MR B17 ",
"SliceTiming": [
1.255,
0,
1.33250000002,
0.07750000001,
1.41250000001,
0.1575,
1.49000000002,
0.23500000002,
1.5675,
0.3125,
1.64750000002,
0.39250000002,
1.72500000001,
0.47,
1.80250000002,
0.55000000002,
1.88250000001,
0.6275,
1.96000000002,
0.70500000002,
2.04000000001,
0.785,
2.11750000002,
0.86250000002,
2.19500000001,
0.94,
2.27500000002,
1.02000000002,
2.35250000001,
1.0975,
2.43000000002,
1.17500000002
],
"InPlanePhaseEncodingDirectionDICOM": "COL ",
"SequenceName": "*epfid2d1_64 ",
"SAR": 0.09241824984141,
"PercentPhaseFOV": 100,
"PulseSequenceType": "*epfid2d1_64 ",
"ImageType": "ORIGINAL\\\\PRIMARY\\\\FMRI\\\\NONE\\\\ND\\\\MOSAIC ",
"SliceOrder": "interleaved ",
"ProtocolName": "Rest_IBIS ",
"FlipAngle": 90,
"MagneticFieldStrength": 3,
"RepetitionTime": 2.5,
"ScanningSequence": "EP ",
"PixelBandwidth": 1905,
"PhaseEncodingSteps": 64,
"EchoNumber": 1,
"TotalReadoutTime": "not supplied as the values read from the MINC header seem erroneous, due most likely to a dcm2mnc conversion problem",
"PatientPosition": "HFS ",
"EffectiveEchoSpacing": "not supplied as the values read from the MINC header seem erroneous, due most likely to a dcm2mnc conversion problem",
"ImagingFrequency": 123.208496,
"SeriesDescription": "Rest_IBIS ",
"Manufacturer": "SIEMENS ",
"ReceiveCoilName": "HeadMatrixix\\\\ ",
"SeriesNumber": 17,
"MRAcquisitionType": "2D ",
"SliceThickness": 4,
"AcquisitionNumber": 1,
"ImageOrientationPatientDICOM": "0.99999083972899\\\\-2.22577821e-005\\\\-0.0042801825544\\\\-4.3724682e-009\\\\0.99998647394974\\\\-0.005201145793 ",
"ManufacturerModelName": "TrioTim ",
"DeviceSerialNumber": "35182 ",
"EchoTime": 0.027
}
sub-300125/ses-V1/func/sub-300125_ses-V1_task-rest_run-2_bold.json Evidence: .SliceTiming[1] should be >= 0
{
"PixelBandwidth" : 1905,
"PhaseEncodingSteps" : 64,
"EchoNumber" : 1,
"TotalReadoutTime" : "not supplied as the values read from the MINC header seem erroneous, due most likely to a dcm2mnc conversion problem",
"PatientPosition" : "HFS ",
"EffectiveEchoSpacing" : "not supplied as the values read from the MINC header seem erroneous, due most likely to a dcm2mnc conversion problem",
"ImagingFrequency" : 123.208496,
"SeriesDescription" : "bas_MoCoSeries ",
"Manufacturer" : "SIEMENS ",
"ReceiveCoilName" : "HeadMatrixix\\\\ ",
"SeriesNumber" : 18,
"MRAcquisitionType" : "2D ",
"SliceThickness" : 4,
"AcquisitionNumber" : 1,
"ImageOrientationPatientDICOM" : "0.99999083972899\\\\-2.22577821e-005\\\\-0.0042801825544\\\\-4.3724682e-009\\\\0.99998647394974\\\\-0.005201145793 ",
"ManufacturerModelName" : "TrioTim ",
"EchoTime" : 0.027,
"DeviceSerialNumber" : "35182 ",
"TaskName" : "rest",
"Modality" : "MRI__ ",
"SequenceVariant" : "SK ",
"SoftwareVersions" : "syngo MR B17 "
"SliceTiming" : [
0,
-1.255,
0.07750000001,
-1.17749999999,
0.1575,
-1.0975,
0.23500000002,
-1.01999999999,
0.3125,
-0.9425,
0.39250000002,
-0.86249999999,
0.47,
-0.785,
0.54750000002,
-0.70499999999,
0.6275,
-0.6275,
0.70500000002,
-0.54999999999,
0.785,
-0.47,
0.86250000002,
-0.39249999999,
0.94,
-0.315,
1.02000000002,
-0.23499999999,
1.0975,
-0.1575,
1.17500000002,
-0.07999999999
],
"InPlanePhaseEncodingDirectionDICOM" : "COL ",
"SequenceName" : "*epfid2d1_64 ",
"SAR" : 0.09241824984141,
"PercentPhaseFOV" : 100,
"PulseSequenceType" : "*epfid2d1_64 ",
"ProtocolName" : "Rest_IBIS ",
"ImageType" : "DERIVED\\\\PRIMARY\\\\FMRI\\\\ND\\\\MOCO\\\\MOSAIC ",
"SliceOrder" : "interleaved ",
"FlipAngle" : 90,
"MagneticFieldStrength" : 3,
"RepetitionTime" : 2.5,
"ScanningSequence" : "EP "
}
After having looked at it in details with Camille, those errors are due to the quality of the RB data so closing the issue as the script works well.