If CIVET is sent to 'recover' mode when its T1 input file has been cleared from the DP cache, it fails in a different way that CBRAIN can't detect right now, so the task is erroneously marked as Completed.
Two improvements to fix this:
re-sync input files in cluster_commands() (which is invoked after error recovery) to make sure the T1 is there
check for the string Stopped processing all pipelines. at the end of the CIVET output.
prioux
commented
7 years ago
If CIVET is sent to 'recover' mode when its T1 input file has been cleared from the DP cache, it fails in a different way that CBRAIN can't detect right now, so the task is erroneously marked as
Completed.Two improvements to fix this:
Stopped processing all pipelines.at the end of the CIVET output.