acope3 / RibModelFramework

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Deprecate split.serine for initializeParameterObject #372

Open acope3 opened 2 years ago

acope3 commented 2 years ago

Based on SequenceSummary.cpp, the split.serine parameter doesn't actually do anything. Given the weak mutation assumption of ROC and FONSE, seems like we need to keep Ser4 (S) and Ser2 (Z) separate.