search

acoppock / Green-Lab-SOP

Standard Operating Procedures for Don Green's Lab at Columbia
51 stars 19 forks source link

BMlmSE() with fixed effects? #8

Open yukitakahashi1 opened 5 years ago

yukitakahashi1 commented 5 years ago

Hi! I'm now preparing my experiment and referring to this nice SOP. Could we use BMlmSE() function with fixed effects? It only accepts lm() objects, so with factor() we get very sparse X and BMlmSE() stops working.

linstonwin commented 5 years ago

Thanks for your kind comment! I'm not actively involved in the SOP anymore and also haven't been following the literature on this issue recently, but you might want to take a look at the clubSandwich package and the paper by James Pustejovsky and Beth Tipton:

https://www.jepusto.com/software/clubsandwich/

All best wishes, Winston

yukitakahashi1 commented 5 years ago

Thank you very much Winston - I will check them! Sincerely, Yuki