adamjgnoel / AcCoRD

Actor-based Communication via Reaction-Diffusion. A molecular communication simulator. Simulates stochastic reaction-diffusion systems.
https://warwick.ac.uk/adamnoel/software/accord/
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Mesoscopic surface regions #51

Open adamjgnoel opened 8 years ago

adamjgnoel commented 8 years ago

Current implementation of surface regions is in the microscopic regime only. In fact, microscopic surfaces cannot even be neighbors of mesoscopic regions. Mesoscopic surfaces will require some special consideration, namely:

adamjgnoel commented 7 years ago

Deferring milestone for this issue. Updating reaction propensities for surface reactions is non-trivial. Should refer to how this is done (if at all) in existing mesoscopic tools. Otherwise, may need to derive directly.