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adamsardar / stoneTrees

Integrating 'omics data with biological networks by solving Steiner Tree problems
Mozilla Public License 2.0
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Use rbinom rather than sample for bootstraps #13

Closed adamsardar closed 4 years ago

adamsardar commented 4 years ago

Re: bootstrap sampling of fixed terminals.

At current we use sampling with replacement, but a coin flip per node (c.f. percolation process) would be better I think.

I think that I imported the concept of bootstrap sampling a little too literally from phylogenetics, whereby alignment sites are sampled with replacement.