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adarob
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eXpress
Streaming fragment assignment and quantification for high-throughput sequencing.
bio.math.berkeley.edu/eXpress
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No idea where to submit this - piano-scribe is AMAZING, but there's a few issues...
#22
iFUCKINGHATEcomputers
opened
4 years ago
0
Please tag a new release
#21
jonchang
closed
4 years ago
2
cmake: build in c++11 mode for newer protobufs
#20
jonchang
closed
4 years ago
0
Fix build with gcc > 6
#19
hartzell
closed
5 years ago
1
Build fails with gcc > 6 (will PR the fix from the Debian team)
#18
hartzell
closed
5 years ago
0
cmake: fix linking order for gcc
#17
jonchang
closed
6 years ago
1
cmake: don't link against librt on macOS
#16
jonchang
closed
6 years ago
0
Please add release tags
#15
tillea
closed
6 years ago
1
Broken links and change of parameters
#14
DimitrisZisis
opened
7 years ago
0
Broken links
#13
sjackman
closed
7 years ago
4
CMake library updates
#12
nathanweeks
closed
6 years ago
0
softclipped parts of reads as considered as indels
#11
pavanvidem
opened
8 years ago
0
all log messages to stderr
#10
allenday
closed
8 years ago
1
info to stderr
#9
allenday
closed
6 years ago
2
Fail on sorted bam input
#8
bwlang
opened
9 years ago
0
Support paired reads ending in /1 and /2
#7
adarob
opened
9 years ago
0
windows end-of-line characters break eXpress
#6
blahah
opened
10 years ago
0
TPM is always NaN or 0
#5
MKreitzman
closed
10 years ago
1
double free or corruption
#4
blahah
opened
10 years ago
3
Tests
#3
blahah
opened
10 years ago
1
eXpress can't handle empty lines in FASTA files
#2
blahah
closed
10 years ago
3
add TPM to output
#1
blahah
closed
10 years ago
8