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adimitromanolakis / sim1000G

Simulation of rare and common variants based on 1000 genomes data
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reading > 8 million Variants #7

Open TeaByrd opened 3 years ago

TeaByrd commented 3 years ago

Hello,

Very extraordinary request: Is this tool able to simulate Samples for > 8 million variants? Currently my R session crashes, when I'm trying to read in the vcf file .

Best, Thomas

adimitromanolakis commented 3 years ago

Hi Thomas,

this is not currently possible with sim1000G, although we might extend our software in the future, it is unlikely to be able to simulate such a number of variants.

Best, Apostolos

On Mon, 2 Nov 2020 at 17:02, Thomas Lordick notifications@github.com wrote:

Hello,

Very extraordinary request: Is this tool able to simulate Samples for > 8 million variants? Currently my R session crashes, when I'm trying to read in the vcf file .

Best, Thomas

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/adimitromanolakis/sim1000G/issues/7, or unsubscribe https://github.com/notifications/unsubscribe-auth/AEGJVY37LNVF5BF7QFFRLQDSN3CXDANCNFSM4THSJVNQ .

TeaByrd commented 3 years ago

Hi Thomas, this is not currently possible with sim1000G, although we might extend our software in the future, it is unlikely to be able to simulate such a number of variants. Best, Apostolos … On Mon, 2 Nov 2020 at 17:02, Thomas Lordick @.***> wrote: Hello, Very extraordinary request: Is this tool able to simulate Samples for > 8 million variants? Currently my R session crashes, when I'm trying to read in the vcf file . Best, Thomas — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#7>, or unsubscribe https://github.com/notifications/unsubscribe-auth/AEGJVY37LNVF5BF7QFFRLQDSN3CXDANCNFSM4THSJVNQ .

Ok. Thanks for the quick respond