Adding brucella to default species

adrlar / CanSNPer

A hierarchical genotype classifier of clonal pathogens

GNU General Public License v3.0

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Adding brucella to default species #7

Closed druvus closed 8 years ago

druvus commented 8 years ago

It would a nice improvement to include Brucella to the existing organisms that are included by default.

druvus commented 8 years ago

This was closed by #9

standage commented 4 years ago

It looks like #9 added the SNP and TREE files to the project root directory, but this data is not included in CanSNPerDB.db. I tried adding it myself, but the --import_seq_file doesn't seem to support multiple chromosomes/replicons per species. Can you provide an update to the CanSNPerDB.db, file or instructions for importing all the data?

druvus commented 4 years ago

See my answer at #28