XY dim files looking for Z dimension during segmentation

aelefebv / nellie

Nellie: Automated organelle segmentation, tracking, and hierarchical feature extraction in 2D/3D live-cell microscopy

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XY dim files looking for Z dimension during segmentation #20

Closed aelefebv closed 4 months ago

aelefebv commented 4 months ago

File "/Users/austin/GitHub/nellie_new/nellie/nellie/segmentation/labelling.py", line 25, in init self.min_z_radius_um = min(self.im_info.dim_sizes['Z'], 0.2) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ TypeError: '<' not supported between instances of 'float' and 'NoneType'