Closed ferewi closed 1 week ago
aeon
I have added the following labels to this PR based on the title: [ $\color{#d73a4a}{\textsf{bug}}$ ]. I have added the following labels to this PR based on the changes made: [ $\color{#BCAE15}{\textsf{classification}}$ ]. Feel free to change these if they do not properly represent the PR.
The Checks tab will show the status of our automated tests. You can click on individual test runs in the tab or "Details" in the panel below to see more information if there is a failure.
If our pre-commit
code quality check fails, any trivial fixes will automatically be pushed to your PR unless it is a draft.
Don't hesitate to ask questions on the aeon
Slack channel if you have any.
These checkboxes will add labels to enable/disable CI functionality for this PR. This may not take effect immediately, and a new commit may be required to run the new configuration.
pre-commit
checks for all filesmypy
typecheck testspytest
tests and configurationscodecov
testspre-commit
fixes (always disabled for drafts)this is good but we need a little time to discuss, I will put it on the agenda for the dev meeting on friday
I was a bit caught up last week hence my late reply. @MatthewMiddlehurst I think your're right, the new parameter is actually not needed. I was thinking that given a large unbalanced dataset, the chance for drawing a subsample that contains just one class is high, but given the subsample size of 70% this chance is around 0.5 in the worst case. So just resampling until a valid sample is obtained should be fine.
LGTM, thanks.
@all-contributors add @ferewi for bug
@MatthewMiddlehurst
I've put up a pull request to add @ferewi! :tada:
Reference Issues/PRs
Fixes #1726
What does this implement/fix? Explain your changes.
Added new attribute 'max_subsamples' to subsample multiple times in case of unbalanced datasets giving subsamples with only one class. This caused TDE and HC2 to fail. If a subsample with only a sinlge class is found, subsampling is repeated until the number of classes in the subsample is >1 or until max_subsamples is reached. In the latter case an AttributeError is raised.
Does your contribution introduce a new dependency? If yes, which one?
No
Any other comments?
In the Issue I proposed two ideas how to fix this and I went for a modified option 1 that does not lead to potentially infinite loops as it is more than 3 times faster compared to option 2 (StratifiedShuffleSplit).
PR checklist
@all-contributors add @ferewi for code
For all contributions
For new estimators and functions
does not apply
__maintainer__
at the top of relevant files and want to be contacted regarding its maintenance. Unmaintained files may be removed. This is for the full file, and you should not add yourself if you are just making minor changes or do not want to help maintain its contents.For developers with write access
does not apply