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aertslab / GENIE3

GENIE3 (GEne Network Inference with Ensemble of trees) R-package
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Installation of GENIE3 into R #3

Closed prajayshah closed 3 years ago

prajayshah commented 6 years ago

Hi I've tried installing GENIE3 into R, but I keep getting hit with this:

Warning message:
package ‘GENIE3’ is not available (for R version 3.4.0)

Any ideas why this is a problem?

Thanks,

Prajay

s-aibar commented 6 years ago

If you are trying to install GENIE3 from Bioconductor with biocLite("GENIE3"), the problem is probably the R version. The current version of Bioconductor requires R >=3.4.2, but you have 3.4.0.

You can try to install it directly from the source with: install.packages("GENIE3_1.0.0.tar.gz", repos=NULL, type="source") or from this Github repository with: devtools::install.github(...)

alnf commented 6 years ago

I have problem now with R 3.4.3:

package ‘GENIE3’ is not available (for R version 3.4.3)

While for 3.4.1 I was able to install GENIE3 using biocLite()

RobDer00 commented 6 years ago

I am also having an issue with 3.4.3 if I go back to version 3.4.2, I get the same message: package ‘GENIE3’ is not available (for R version 3.4.2)