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aertslab / GENIE3

GENIE3 (GEne Network Inference with Ensemble of trees) R-package
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Allow custom foreach backend? #8

Closed mschubert closed 5 years ago

mschubert commented 5 years ago

Would it be possible to adapt the parallel processing code so that a user can supply their own foreach (or BiocParallel) backend?

This would make it possible to construct the weight matrix not only using multiple cores, but also multiple jobs on HPC.

s-aibar commented 5 years ago

Thank you for the suggestion 👍 I have integrated your pull request