search

aertslab / RcisTarget

RcisTarget: Transcription factor binding motif enrichment
34 stars 9 forks source link

RcisTarget for region enrichment #16

Closed qingnanl closed 4 years ago

qingnanl commented 4 years ago

Dear Developers,

Thanks for making this great package. I would like to ask whether this package can also take gemonic regions as input for motif enrichment. It would be extremely helpful in comparing gene set enrichment and ATAC-seq peak enrichment.

Thanks,

qingnanl

s-aibar commented 4 years ago

Dear @qingnanl ,

Yes, you can use either genes or genomic regions as input for RcisTarget.