Thanks for this great package and so many ways to use it. Currently, I am trying to run it using the docker container (0.10.3) on bulk RNAseq dataset. I could successfully run it using the docker image. However, I am struggling to understand the output. For examples, the regulon output as .csv/.tsv contains multiple columns where the TargetGenes column contains the target gene names and a score. What does this score mean? [('CDK4', 5.242832529888977), ('CLN3', 0.6464564415559007),....
My second question is, can we have multiple output format in a single run? For example both .tsv and .gmt output?
Hi,
Thanks for this great package and so many ways to use it. Currently, I am trying to run it using the docker container (0.10.3) on bulk RNAseq dataset. I could successfully run it using the docker image. However, I am struggling to understand the output. For examples, the regulon output as .csv/.tsv contains multiple columns where the TargetGenes column contains the target gene names and a score. What does this score mean?
[('CDK4', 5.242832529888977), ('CLN3', 0.6464564415559007),....My second question is, can we have multiple output format in a single run? For example both .tsv and .gmt output?
Looking forward to hearing from you.
Nurun