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aertslab / SCENIC

SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
http://scenic.aertslab.org
GNU General Public License v3.0
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identify regulons - custom gene list #233

Closed paolo-kunderfranco closed 2 years ago

paolo-kunderfranco commented 2 years ago

Dear All,

I would like to find only active regulons whose targets intersects with a custom gene list.

Is there a way to filter TF datasets prior to run runCorrelation and runGenie3 functions?

Best Paolo