aertslab / SCENIC

SCENIC is an R package to infer Gene Regulatory Networks and cell types from single-cell RNA-seq data.
http://scenic.aertslab.org
GNU General Public License v3.0
394 stars 94 forks source link

Installation issue because of 'arrow' package #401

Open abspangler13 opened 11 months ago

abspangler13 commented 11 months ago

Hello,

I'm trying to install SCENIC for R/4.2.1 but it fails due to the arrow package. I've tried installing arrow separately, but it also fails due a compilation error. I've installed feather 0.3.5, but the SCENIC installation still fails.

Referencing a previous issue about this below:

          These errors seem to be related to the R version... 

We had to change the use of feather package by arrow.

If you keep having the issue with the latest version of R and related packages (e.g. RcisTarget), please let us know.

(I'll close the issue, but feel free to re-open or post a new one with updated information if the problem persists...)

Originally posted by @s-aibar in https://github.com/aertslab/SCENIC/issues/168#issuecomment-1092844786